Liu · Current issues in molecular biology 2026 · Ex vivo microbial bioreactor and in vitro cell culture study · n=?

Perfluorooctanoic Acid (PFOA) Alters the Structure of the Gut Microbial Community and Colonoid Transcription.

Level 5 - mechanism / opinion, no new human data

Bench research using ex vivo human fecal microbial culture and in vitro colonoids without in vivo human testing.

PubMed 42353547 · doi:10.3390/cimb48060542 · record verified 2026-08-26

What was done

Fecal samples from healthy adult donors aged 25–70 years were cultured in an ex vivo gut simulator (SIFR) with 10 mg/L perfluorooctanoic acid (PFOA) to model accumulated exposure. Microbial changes were evaluated using flow cytometry and shotgun metagenomic sequencing. Conditioned bacterial culture media with and without PFOA were then applied to human colonoids to evaluate transepithelial electrical resistance (TEER) and transcription related to tissue junction integrity, mucin biosynthesis, and immune response.

What was found

PFOA exposure altered the microbial community structure, with Pseudomonadota replacing Bacteroidota and Bacillota (including short-chain fatty acid-producing taxa) as the dominant phylum. Media from PFOA-treated microbial cultures exerted stronger effects on colonoid protective responses (tissue junction tightening, mucin biosynthesis, and immune markers) than untreated bacterial culture media or PFOA alone. The abstract reports no exact numerical values or effect sizes.

Why it matters

These findings suggest that PFOA-induced intestinal barrier alterations may be driven or exacerbated by dysregulated gut microbial metabolites rather than direct chemical action alone.

Limits

The study relies entirely on ex vivo and in vitro cell culture models, which cannot replicate whole-organism physiological dynamics. The exact human donor sample size is not stated in the abstract, only a single high concentration (10 mg/L) was evaluated, and quantitative data are omitted.